Why PyTorch Doesn't Work for Spatial Storage
Why PyTorch Doesn’t Work for Spatial Storage
Section titled “Why PyTorch Doesn’t Work for Spatial Storage”The Fundamental Mismatch
Section titled “The Fundamental Mismatch”PyTorch is designed for tensor operations on fixed-size arrays. MagickCache requires dynamic spatial storage with variable geometry. These are fundamentally incompatible paradigms.
PyTorch’s Tensor Model
Section titled “PyTorch’s Tensor Model”What PyTorch Excels At
Section titled “What PyTorch Excels At”# PyTorch tensor operationsx = torch.tensor([[1, 2, 3], [4, 5, 6]]) # Fixed 2x3 matrixy = torch.tensor([[7, 8, 9], [10, 11, 12]]) # Same dimensions requiredresult = torch.matmul(x, y.T) # Matrix multiplicationCharacteristics:
- Fixed dimensions: Tensors have predetermined shapes
- Dense operations: Every element participates in calculations
- Batch processing: Operations on entire arrays at once
- GPU parallelization: SIMD operations across tensor elements
What PyTorch Struggles With
Section titled “What PyTorch Struggles With”# What we need for spatial storagespace = SpatialStorage()space.store_at((15.7, 23.1, 8.9), "data1") # Arbitrary coordinatesspace.store_at((156.3, 2.7, 99.1), "data2") # Completely different locationresults = space.query_sphere((15.0, 23.0, 9.0), radius=2.0) # Variable resultsProblems:
- Dynamic coordinates: Can’t predefine tensor dimensions
- Sparse data: Most spatial coordinates are empty
- Variable results: Query results have unpredictable sizes
- Geometric operations: Spatial relationships aren’t matrix math
Tensor Operations vs Spatial Operations
Section titled “Tensor Operations vs Spatial Operations”Matrix Multiplication (PyTorch)
Section titled “Matrix Multiplication (PyTorch)”[a b] [e f] [ae+bg af+bh][c d] [g h] = [ce+dg cf+dh]Properties:
- Fixed input/output dimensions
- Every element affects every result
- Parallelizable with SIMD
- Mathematically regular
Spatial Query (BALLS Cache)
Section titled “Spatial Query (BALLS Cache)”Query: Find all points within sphere(center=(0,0,0), radius=5)Result: Variable number of points with irregular distributionProperties:
- Dynamic input/output sizes
- Only nearby elements affect results
- Requires spatial indexing
- Geometrically irregular
Memory Layout Issues
Section titled “Memory Layout Issues”PyTorch Memory Model
Section titled “PyTorch Memory Model”# Dense tensor - every position has a valuetensor = torch.zeros(1000, 1000, 1000) # 1 billion floats allocated# Uses 4GB+ memory even if mostly emptySpatial Storage Memory Model
Section titled “Spatial Storage Memory Model”# Sparse spatial storage - only occupied coordinatesspatial = SpatialStorage()spatial.store_at((100, 500, 750), value) # Only allocates what's neededspatial.store_at((200, 600, 850), value) # Minimal memory usageDynamic vs Static Structure
Section titled “Dynamic vs Static Structure”PyTorch: Static Structure
Section titled “PyTorch: Static Structure”# Must know dimensions at creation timemodel = torch.nn.Linear(784, 128) # Fixed: 784 inputs → 128 outputs# Cannot dynamically add new input dimensions or change structureSpatial Storage: Dynamic Structure
Section titled “Spatial Storage: Dynamic Structure”# Can add data anywhere, anytimestorage.store_at((x, y, z), data) # Any coordinates allowedstorage.expand_region(new_bounds) # Dynamic space expansionIndexing and Access Patterns
Section titled “Indexing and Access Patterns”PyTorch Indexing
Section titled “PyTorch Indexing”# Array-style indexingtensor[0, 5, 10] # Access element at fixed indicestensor[0:5, :, 10:20] # Slice rectangular regionsSpatial Indexing
Section titled “Spatial Indexing”# Coordinate-based indexingstorage.get_at((15.7, 23.1, 8.9)) # Access by spatial coordinatestorage.query_sphere(center, radius) # Query by geometric relationshipComputational Complexity
Section titled “Computational Complexity”PyTorch Operations
Section titled “PyTorch Operations”Matrix multiplication: O(n³)Element-wise operations: O(n)Reduction operations: O(n)All operations scale with tensor size.
Spatial Operations
Section titled “Spatial Operations”Spatial query: O(r³) where r = search radiusPoint insertion: O(log n) with spatial indexingNeighborhood search: O(k) where k = results foundOperations scale with geometric parameters, not total data size.
GPU Utilization Differences
Section titled “GPU Utilization Differences”PyTorch GPU Usage
Section titled “PyTorch GPU Usage”# Utilizes all GPU cores for dense operationsresult = torch.matmul(large_tensor_a, large_tensor_b) # Every core workingSpatial Storage GPU Usage
Section titled “Spatial Storage GPU Usage”// Custom CUDA kernels for spatial operations__global__ void spatial_query_kernel(Point* points, Query query, Result* results) { // Each thread handles one spatial region // Irregular workload distribution}Why We Built Custom CUDA Kernels
Section titled “Why We Built Custom CUDA Kernels”PyTorch Limitations
Section titled “PyTorch Limitations”- No spatial primitives: No built-in sphere queries, distance calculations
- Tensor constraints: Can’t efficiently represent sparse spatial data
- Memory overhead: Dense tensor allocation for sparse spatial data
- Fixed operations: Limited to linear algebra operations
Custom CUDA Benefits
Section titled “Custom CUDA Benefits”- Spatial primitives: Native sphere queries, distance calculations, spatial indexing
- Memory efficiency: Only allocate space for actual data points
- Geometric operations: Optimized for spatial relationships
- Variable workloads: Handle irregular spatial distributions
Performance Comparison
Section titled “Performance Comparison”PyTorch Approach (Hypothetical)
Section titled “PyTorch Approach (Hypothetical)”# Trying to do spatial query with PyTorchdef pytorch_spatial_query(tensor_space, center, radius): # Create coordinate grids x_coords = torch.arange(tensor_space.shape[0]) y_coords = torch.arange(tensor_space.shape[1]) z_coords = torch.arange(tensor_space.shape[2])
# Compute distances (very expensive) distances = torch.sqrt((x_coords - center[0])**2 + (y_coords - center[1])**2 + (z_coords - center[2])**2)
# Find elements within radius mask = distances <= radius return tensor_space[mask] # Still O(n³) complexity!BALLS Cache Approach
Section titled “BALLS Cache Approach”// Native spatial query - O(r³) complexitySearchResult* spatial_query(SpatialStorage* storage, Point center, float radius) { // Only check grid cells within radius GridCell* relevant_cells = get_cells_in_sphere(center, radius);
// Only examine points in relevant cells for (cell in relevant_cells) { check_points_in_cell(cell, center, radius); }}Framework Design Philosophy
Section titled “Framework Design Philosophy”PyTorch Philosophy
Section titled “PyTorch Philosophy”“Provide building blocks for neural networks through tensor operations”
- Assumes dense, regular computational patterns
- Optimizes for batch processing
- Designed for gradient-based optimization
BALLS Cache Philosophy
Section titled “BALLS Cache Philosophy”“Provide native spatial storage with geometric operations”
- Assumes sparse, irregular spatial patterns
- Optimizes for proximity relationships
- Designed for spatial locality
When PyTorch Makes Sense
Section titled “When PyTorch Makes Sense”Neural Network Training
Section titled “Neural Network Training”# Perfect for thisloss = criterion(model(batch_input), batch_targets)loss.backward()optimizer.step()Dense Linear Algebra
Section titled “Dense Linear Algebra”# Perfect for thisembeddings = torch.matmul(input_vectors, weight_matrix)When Spatial Storage Makes Sense
Section titled “When Spatial Storage Makes Sense”Proximity Searches
Section titled “Proximity Searches”# Perfect for thisnearby_items = storage.query_sphere(user_location, search_radius)Dynamic Spatial Data
Section titled “Dynamic Spatial Data”# Perfect for thisstorage.store_at(gps_coordinate, sensor_reading)spatial_clusters = storage.find_dense_regions()The Bottom Line
Section titled “The Bottom Line”PyTorch is a hammer, and not every problem is a nail.
For spatial storage, we need:
- Geometric operations, not tensor operations
- Sparse efficiency, not dense parallelism
- Dynamic structure, not fixed dimensions
- Spatial indexing, not array indexing
This is why MagickCache required custom C implementation with specialized CUDA kernels - no existing framework was designed for our spatial storage paradigm.
Sometimes you have to build the tool that doesn’t exist yet.